DGKB

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DGKB mutation is significantly associated with the RNA expression of many other genes, with 327 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible DGKB-associated genes across cancer lineages are KRTAP13-2, ARGFX, and ANKRD20A4P. Each is linked with DGKB in more than 1 cancer types. Because this analysis shows association rather than direction, both DGKB-to-partner and partner-to-DGKB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KRTAP13-2 grouped by DGKB-low versus DGKB-high in LUNG_NSCLC_LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DGKB→partner) and Y-score (partner→DGKB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCKRTAP13-2 →+0.229+4.643<.001.00832
UPPER_AERODIGESTIVE_TRACTARGFX →+0.062+4.357<.001.00632
LARGE_INTESTINEANKRD20A4P →+0.436+3.169<.001.00932
LUNG_NSCLC_LUADCSMD1 →+1.089+2.785.001.00432
LUNG_NSCLC_LUSCARMH2 →+0.020+4.643<.001.00831
UPPER_AERODIGESTIVE_TRACTTAAR2 →+0.067+4.357<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 327 associations by consensus.

KRTAP13-2 by DGKB expression — LUNG_NSCLC_LUSC

Box plot of KRTAP13-2 in DGKB-low vs DGKB-high samples in LUNG_NSCLC_LUSC.

Explore this box plot interactively →

Exploration