DEPDC5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DEPDC5 protein abundance is significantly associated with the RNA expression of many other genes, with 4,465 significant associations in total. GBM shows the largest number of these associations.

The most reproducible DEPDC5-associated genes across cancer lineages are SLN, ANKRD54, and HSCB. Each is linked with DEPDC5 in more than 2 cancer types. Because this analysis shows association rather than direction, both DEPDC5-to-partner and partner-to-DEPDC5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DEPDC5 versus SLN in HNSC, with a Pearson correlation of 0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DEPDC5→partner) and Y-score (partner→DEPDC5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCSLN →+2.635+0.359.002<.00133
HNSCANKRD54 →+0.479+0.219.002.00433
BRCAHSCB →+0.530+0.314<.001<.00133
COADSRPX →+1.853+1.430<.001<.00132
COADSFRP1 →+2.150+1.241<.001<.00132
COADC7 →+2.821+1.062.003.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,465 associations by consensus.

DEPDC5 vs SLN — HNSC

Per-sample scatter of DEPDC5 vs SLN in HNSC (Pearson r = 0.32).

Explore this scatter interactively →

Exploration