DENND5B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DENND5B protein abundance is significantly associated with the RNA expression of many other genes, with 1,740 significant associations in total. GBM shows the largest number of these associations.

The most reproducible DENND5B-associated genes across cancer lineages are AFAP1L2, MT1A, and IGLV1-44. Each is linked with DENND5B in more than 1 cancer types. Because this analysis shows association rather than direction, both DENND5B-to-partner and partner-to-DENND5B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DENND5B versus AFAP1L2 in OV, with a Pearson correlation of -0.61.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DENND5B→partner) and Y-score (partner→DENND5B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVAFAP1L2 →-2.944-0.608<.001.00832
LUADMT1A →+1.776+0.414.001.00932
LSCCIGLV1-44 →+1.107+0.202.003.00832
LSCCIGHV3-38 →+0.741+0.307.005.00632
LSCCNPAP1P6 →+0.205+0.294<.001.00432
CCRCCRAMP1 →+1.528+0.398<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,740 associations by consensus.

DENND5B vs AFAP1L2 — OV

Per-sample scatter of DENND5B vs AFAP1L2 in OV (Pearson r = -0.61).

Explore this scatter interactively →

Exploration