DENND1C

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DENND1C mutation is significantly associated with the RNA expression of many other genes, with 21 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible DENND1C-associated genes across cancer lineages are ODF1, MS4A14, and OR6K3. Each is linked with DENND1C in more than 1 cancer types. Because this analysis shows association rather than direction, both DENND1C-to-partner and partner-to-DENND1C results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DENND1C→partner) and Y-score (partner→DENND1C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSODF1 →+0.996+4.906<.001.00631
OESOPHAGUSMS4A14 →+0.053+4.906<.001.00631
OESOPHAGUSOR6K3 →+0.006+4.906<.001.00631
OESOPHAGUSSPINK8 →+0.263+4.906<.001.00631
OESOPHAGUSC2orf83 →+0.020+4.906<.001.00631
LARGE_INTESTINECOMP →+0.400+3.459<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

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