DEAF1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DEAF1 protein abundance is significantly associated with the RNA expression of many other genes, with 3,796 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible DEAF1-associated genes across cancer lineages are ATG16L2, PHYHD1, and IGHV1OR16-3. Each is linked with DEAF1 in more than 1 cancer types. Because this analysis shows association rather than direction, both DEAF1-to-partner and partner-to-DEAF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DEAF1 versus ATG16L2 in BRCA, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DEAF1→partner) and Y-score (partner→DEAF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAATG16L2 →+0.863+0.378.004.00132
BRCAPHYHD1 →+1.307+0.292<.001.00332
LUADIGHV1OR16-3 →+0.929+0.226.001.00332
PDACMRPS10 →-0.742-0.431<.001.00132
OVMIR210HG →-0.853-0.567.005.00532
BRCAPIK3IP1 →+0.848+0.440.003.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,796 associations by consensus.

DEAF1 vs ATG16L2 — BRCA

Per-sample scatter of DEAF1 vs ATG16L2 in BRCA (Pearson r = 0.39).

Explore this scatter interactively →

Exploration