DDX54

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DDX54 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,935 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible DDX54-associated proteins across cancer lineages are TMPO, TRAFD1, and SRSF9. Each is linked with DDX54 in more than 6 cancer types. Because this analysis shows association rather than direction, both DDX54-to-partner and partner-to-DDX54 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DDX54 versus TMPO in GBM, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (DDX54→partner) and Y-score (partner→DDX54) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTMPO →+0.419+0.339.001<.00137
GBMTRAFD1 →+0.278+0.279.001.00236
LSCCSRSF9 →+0.476+0.576<.001<.00135
OVTAF12 →+0.286+0.368<.001.00435
GBMTRRAP →+0.215+0.248.001.00126
LSCCUNG →+0.708+0.484<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,935 associations by consensus.

DDX54 vs TMPO — GBM

Per-sample scatter of DDX54 vs TMPO in GBM (Pearson r = 0.41).

Explore this scatter interactively →

Exploration