DDX54

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DDX54 mutation is significantly associated with the RNA expression of many other genes, with 1,396 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DDX54-associated genes across cancer lineages are RPL17P50, GCHFR, and SNORD115-45. Each is linked with DDX54 in more than 3 cancer types. Because this analysis shows association rather than direction, both DDX54-to-partner and partner-to-DDX54 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPL17P50 grouped by DDX54-low versus DDX54-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DDX54→partner) and Y-score (partner→DDX54) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRPL17P50 →+0.351+1.928.006.00834
UCECGCHFR →+0.732+1.815<.001.00233
CESCSNORD115-45 →+0.289+4.757<.001.00433
SKCMRNA5SP247 →+0.633+3.178<.001.00332
COADHUNK →-1.159-3.459.004.00532
COADLYG1 →+0.795+3.553<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,396 associations by consensus.

RPL17P50 by DDX54 expression — UCEC

Box plot of RPL17P50 in DDX54-low vs DDX54-high samples in UCEC.

Explore this box plot interactively →

Exploration