DDX54

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DDX54 mutation is significantly associated with the RNA expression of many other genes, with 508 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible DDX54-associated genes across cancer lineages are RASAL1, LRIT1, and GMCL2. Each is linked with DDX54 in more than 2 cancer types. Because this analysis shows association rather than direction, both DDX54-to-partner and partner-to-DDX54 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RASAL1 grouped by DDX54-low versus DDX54-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DDX54→partner) and Y-score (partner→DDX54) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaRASAL1 →+1.403+3.489.005.00133
UPPER_AERODIGESTIVE_TRACTLRIT1 →+0.028+3.285.004.00633
LARGE_INTESTINEGMCL2 →+0.037+3.691.002.00233
BLOOD_LeukemiaCNGA2 →+0.025+2.954.004.00532
BLOOD_LeukemiaPRR30 →+0.009+2.684<.001.00432
BLOOD_LeukemiaSBK1 →+1.830+3.214<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 508 associations by consensus.

RASAL1 by DDX54 expression — BLOOD_Leukemia

Box plot of RASAL1 in DDX54-low vs DDX54-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration