DDX52

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DDX52 mutation is significantly associated with the RNA expression of many other genes, with 3,329 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DDX52-associated genes across cancer lineages are VN1R90P, SPRING1P1, and TLE6. Each is linked with DDX52 in more than 1 cancer types. Because this analysis shows association rather than direction, both DDX52-to-partner and partner-to-DDX52 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VN1R90P grouped by DDX52-low versus DDX52-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DDX52→partner) and Y-score (partner→DDX52) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADVN1R90P →+0.147+3.408.001.00932
HNSCSPRING1P1 →+0.148+7.132<.001<.00132
UCECTLE6 →+0.725+2.343.004.00332
UCECGNRH2 →+0.585+3.584<.001.00232
UCECRNU6-1155P →+0.093+4.060.009.00632
UCECLINC01871 →+0.903+3.601.007.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,329 associations by consensus.

VN1R90P by DDX52 expression — COAD

Box plot of VN1R90P in DDX52-low vs DDX52-high samples in COAD.

Explore this box plot interactively →

Exploration