DDB1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DDB1 protein abundance is significantly associated with the RNA expression of many other genes, with 15,599 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible DDB1-associated genes across cancer lineages are TKFC, HSD17B8, and MKS1. Each is linked with DDB1 in more than 6 cancer types. Because this analysis shows association rather than direction, both DDB1-to-partner and partner-to-DDB1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DDB1 versus TKFC in BRCA, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DDB1→partner) and Y-score (partner→DDB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATKFC →+0.667+0.212<.001<.00137
UCECHSD17B8 →+0.886+0.094<.001.00437
HNSCMKS1 →+0.477+0.207<.001<.00136
COADPLEK →-0.952-0.151.007.00636
BRCABCL2A1 →-1.044-0.183.004.00127
BRCAFAM86C2P →+0.480+0.126<.001.00336
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,599 associations by consensus.

DDB1 vs TKFC — BRCA

Per-sample scatter of DDB1 vs TKFC in BRCA (Pearson r = 0.40).

Explore this scatter interactively →

Exploration