DCLRE1C

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DCLRE1C mutation is significantly associated with the RNA expression of many other genes, with 638 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible DCLRE1C-associated genes across cancer lineages are PLA2G3, ANKRD54, and EIF3L. Each is linked with DCLRE1C in more than 1 cancer types. Because this analysis shows association rather than direction, both DCLRE1C-to-partner and partner-to-DCLRE1C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PLA2G3 grouped by DCLRE1C-low versus DCLRE1C-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DCLRE1C→partner) and Y-score (partner→DCLRE1C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEPLA2G3 →+1.150+3.540<.001.00231
LARGE_INTESTINEANKRD54 →+0.482+2.588.002.00431
LARGE_INTESTINEEIF3L →+0.485+3.237.004.00331
LARGE_INTESTINECCDC134 →+0.695+3.131.002.00831
LARGE_INTESTINECBY1 →+0.581+3.459.001.00131
LARGE_INTESTINETOMM22 →+0.540+2.502<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 638 associations by consensus.

PLA2G3 by DCLRE1C expression — LARGE_INTESTINE

Box plot of PLA2G3 in DCLRE1C-low vs DCLRE1C-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration