DBET

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DBET RNA expression is significantly associated with the go_rna of many other GO terms, with 4,940 significant associations in total. STAD shows the largest number of these associations.

The most reproducible DBET-associated GO terms across cancer lineages are tRNA thio-modification, Synaptic vesicle endosomal processing, and Ribosome-associated ubiquitin-dependent protein catabolic process. Each is linked with DBET in more than 9 cancer types. Because this analysis shows association rather than direction, both DBET-to-partner and partner-to-DBET results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, tRNA thio-modification grouped by DBET-low versus DBET-high in READ.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (DBET→partner) and Y-score (partner→DBET) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
READtRNA thio-modification →+0.073+0.228<.001<.001310
READSynaptic vesicle endosomal processing →-0.052-0.245<.001<.00139
READRibosome-associated ubiquitin-dependent protein catabolic process →-0.047-0.207<.001<.00139
READSertoli cell development →-0.036-0.170<.001<.00138
STADNucleoside triphosphate biosynthetic process →+0.058+0.032<.001.00829
STADrRNA pseudouridine synthesis →+0.028+0.024<.001.00519
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,940 associations by consensus.

tRNA thio-modification by DBET expression — READ

Box plot of tRNA thio-modification in DBET-low vs DBET-high samples in READ.

Explore this box plot interactively →

Exploration