CYTIP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CYTIP protein abundance is significantly associated with the RNA expression of many other genes, with 13,591 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CYTIP-associated genes across cancer lineages are CSF2RB, DOCK8, and KCNN3. Each is linked with CYTIP in more than 3 cancer types. Because this analysis shows association rather than direction, both CYTIP-to-partner and partner-to-CYTIP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CYTIP versus CSF2RB in HNSC, with a Pearson correlation of 0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CYTIP→partner) and Y-score (partner→CYTIP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCSF2RB →+1.199+0.710<.001<.00134
HNSCDOCK8 →+1.140+0.998<.001<.00134
HNSCKCNN3 →+0.924+0.780<.001.00134
HNSCPTPN7 →+1.050+0.824<.001<.00134
HNSCFLI1 →+0.892+0.860<.001<.00134
HNSCWAS →+1.416+1.259<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,591 associations by consensus.

CYTIP vs CSF2RB — HNSC

Per-sample scatter of CYTIP vs CSF2RB in HNSC (Pearson r = 0.32).

Explore this scatter interactively →

Exploration