CXXC5

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CXXC5 mutation is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CXXC5-associated genes across cancer lineages are OR10W1, SLC32A1, and CACNG1. Each is linked with CXXC5 in more than 1 cancer types. Because this analysis shows association rather than direction, both CXXC5-to-partner and partner-to-CXXC5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR10W1 grouped by CXXC5-low versus CXXC5-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CXXC5→partner) and Y-score (partner→CXXC5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEOR10W1 →+0.019+4.977<.001.00731
BLOOD_LeukemiaSLC32A1 →+0.602+3.901<.001.00631
BLOOD_LeukemiaCACNG1 →+0.087+3.881<.001.00631
BLOOD_LeukemiaPHOX2B →+0.024+4.365<.001.00231
BLOOD_LeukemiaIRX4 →+0.152+4.469<.001.00131
BLOOD_LeukemiaRFPL3 →+0.037+4.339<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

OR10W1 by CXXC5 expression — LARGE_INTESTINE

Box plot of OR10W1 in CXXC5-low vs CXXC5-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration