CUTA

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CUTA RNA expression is significantly associated with the protein abundance of many other proteins, with 9,131 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CUTA-associated proteins across cancer lineages are RNF5, GNL1, and LEMD2. Each is linked with CUTA in more than 6 cancer types. Because this analysis shows association rather than direction, both CUTA-to-partner and partner-to-CUTA results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CUTA versus RNF5 in OV, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CUTA→partner) and Y-score (partner→CUTA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVRNF5 →+0.838+0.550<.001<.00137
OVGNL1 →+0.454+0.723<.001<.00137
LUADLEMD2 →+0.379+0.503<.001<.00136
OVANKS1A →+0.154+0.442.003<.00135
BRCAWRNIP1 →+0.403+0.508<.001<.00135
PDACAGPAT1 →+0.414+0.313.002.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,131 associations by consensus.

CUTA vs RNF5 — OV

Per-sample scatter of CUTA vs RNF5 in OV (Pearson r = 0.36).

Explore this scatter interactively →

Exploration