CUL9

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CUL9 mutation is significantly associated with the RNA expression of many other genes, with 1,313 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CUL9-associated genes across cancer lineages are GATAD2B, CHUK, and SCO2. Each is linked with CUL9 in more than 2 cancer types. Because this analysis shows association rather than direction, both CUL9-to-partner and partner-to-CUL9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GATAD2B grouped by CUL9-low versus CUL9-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CUL9→partner) and Y-score (partner→CUL9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEGATAD2B →+0.414+1.458.004.00933
LARGE_INTESTINECHUK →+0.440+1.458.002.00933
LARGE_INTESTINESCO2 →+0.436+1.808.009.00133
BLOOD_MyelomaMTRNR2L5 →+0.053+4.807<.001.00632
BLOOD_LymphomaMS4A2 →+0.009+4.643<.001.00532
BREASTGSTZ1 →+1.073+3.099<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,313 associations by consensus.

GATAD2B by CUL9 expression — LARGE_INTESTINE

Box plot of GATAD2B in CUL9-low vs CUL9-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration