CTU1

Across TCGA patient cohorts, CTU1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,489 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CTU1-associated proteins across cancer lineages are USP39, WDR43, and WDR75. Each is linked with CTU1 in more than 5 cancer types. Because this analysis shows association rather than direction, both CTU1-to-partner and partner-to-CTU1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CTU1 versus USP39 in LSCC, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CTU1→partner) and Y-score (partner→CTU1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	USP39 →	+0.276	+0.531	<.001	<.001	3	6
BRCA	WDR43 →	+0.352	+0.540	<.001	.005	3	6
GBM	WDR75 →	+0.284	+0.388	<.001	<.001	3	6
BRCA	ZWILCH →	+0.531	+0.770	<.001	<.001	3	5
UCEC	U2SURP →	+0.266	+0.587	<.001	<.001	3	5
LSCC	UBR5 →	+0.182	+0.529	.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,489 associations by consensus.

CTU1 vs USP39 — LSCC

Explore this scatter interactively →