CTTNBP2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CTTNBP2 mutation is significantly associated with the RNA expression of many other genes, with 5,096 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CTTNBP2-associated genes across cancer lineages are PSMD9, EIF2B2, and PIMREG. Each is linked with CTTNBP2 in more than 3 cancer types. Because this analysis shows association rather than direction, both CTTNBP2-to-partner and partner-to-CTTNBP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PSMD9 grouped by CTTNBP2-low versus CTTNBP2-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CTTNBP2→partner) and Y-score (partner→CTTNBP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMPSMD9 →+0.392+4.045<.001<.00134
UCECEIF2B2 →+0.379+2.705<.001<.00134
UCECPIMREG →+0.597+1.709.001<.00134
SKCMAZGP1 →-1.297-2.321.008.00534
COADIGSF22 →-0.276-2.394.003.00334
LUADSHMT2 →+0.495+2.357.006.00334
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,096 associations by consensus.

PSMD9 by CTTNBP2 expression — SKCM

Box plot of PSMD9 in CTTNBP2-low vs CTTNBP2-high samples in SKCM.

Explore this box plot interactively →

Exploration