CTRC

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CTRC mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CTRC-associated genes across cancer lineages are KIR3DL1, TMEM213, and IRX4. Each is linked with CTRC in more than 1 cancer types. Because this analysis shows association rather than direction, both CTRC-to-partner and partner-to-CTRC results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KIR3DL1 grouped by CTRC-low versus CTRC-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CTRC→partner) and Y-score (partner→CTRC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaKIR3DL1 →+0.026+3.691<.001.00231
BLOOD_LeukemiaTMEM213 →+0.097+4.169<.001.00331
BLOOD_LeukemiaIRX4 →+0.146+3.847<.001.00421
BLOOD_LeukemiaEFNA2 →+0.500+3.643<.001.00621
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

KIR3DL1 by CTRC expression — BLOOD_Leukemia

Box plot of KIR3DL1 in CTRC-low vs CTRC-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration