CTRC

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CTRC mutation is significantly associated with the mutation status of many other genes, with 853 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CTRC-associated genes across cancer lineages are GRIK2, NAV2, and B4GALNT2. Each is linked with CTRC in more than 1 cancer types. Because this analysis shows association rather than direction, both CTRC-to-partner and partner-to-CTRC results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GRIK2 grouped by CTRC-low versus CTRC-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CTRC→partner) and Y-score (partner→CTRC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEGRIK2 →+4.502+5.066.007.00712
BLOOD_LeukemiaNAV2 →+2.202+3.442.002.00212
SOFT_TISSUEB4GALNT2 →+5.502+5.502.003.00312
BLOOD_LeukemiaCCDC88B →+2.465+3.156.005.00512
SOFT_TISSUECDC42BPG →+4.502+5.066.007.00712
BLOOD_LeukemiaFIBP →+4.465+4.465<.001<.00112
Each partner links to its Q-omics profile. Showing the 6 strongest of 853 associations by consensus.

GRIK2 by CTRC expression — SOFT_TISSUE

Box plot of GRIK2 in CTRC-low vs CTRC-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration