CTDSP2

Across TCGA patient cohorts, CTDSP2 mutation is significantly associated with the RNA expression of many other genes, with 1,150 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CTDSP2-associated genes across cancer lineages are RNA5SP411, MIR6074, and RNU6-391P. Each is linked with CTDSP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CTDSP2-to-partner and partner-to-CTDSP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP411 grouped by CTDSP2-low versus CTDSP2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CTDSP2→partner) and Y-score (partner→CTDSP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RNA5SP411 →	+1.365	+2.393	<.001	.001	3	2
SKCM	MIR6074 →	+0.288	+5.219	<.001	.002	3	2
SKCM	RNU6-391P →	+0.246	+5.485	<.001	.001	3	2
COAD	RNU4-81P →	+0.407	+6.149	<.001	<.001	3	2
COAD	RNU6ATAC30P →	+0.879	+4.308	<.001	.009	3	2
SKCM	RPL9P16 →	+0.086	+3.427	.007	.006	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,150 associations by consensus.

RNA5SP411 by CTDSP2 expression — UCEC

Explore this box plot interactively →