CTDSP1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CTDSP1 protein abundance is significantly associated with the RNA expression of many other genes, with 5,750 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CTDSP1-associated genes across cancer lineages are FLAD1, ARPC2, and EZH2. Each is linked with CTDSP1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CTDSP1-to-partner and partner-to-CTDSP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CTDSP1 versus FLAD1 in LSCC, with a Pearson correlation of -0.27.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CTDSP1→partner) and Y-score (partner→CTDSP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCFLAD1 →-0.516-0.208.002.00334
OVARPC2 →+0.716+0.661<.001<.00133
GBMEZH2 →-0.727-0.370<.001<.00133
LSCCGIT1 →-0.565-0.194.004.00733
GBMSMC4 →-0.552-0.257.001.00233
LSCCXPO5 →-0.664-0.207.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,750 associations by consensus.

CTDSP1 vs FLAD1 — LSCC

Per-sample scatter of CTDSP1 vs FLAD1 in LSCC (Pearson r = -0.27).

Explore this scatter interactively →

Exploration