CT47B1

Across TCGA patient cohorts, CT47B1 mutation is significantly associated with the RNA expression of many other genes, with 3,278 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CT47B1-associated genes across cancer lineages are SNRPD1, PSMD11, and PPP5C. Each is linked with CT47B1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CT47B1-to-partner and partner-to-CT47B1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNRPD1 grouped by CT47B1-low versus CT47B1-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CT47B1→partner) and Y-score (partner→CT47B1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUSC	SNRPD1 →	+0.613	+3.459	<.001	.005	3	4
UCEC	PSMD11 →	+0.426	+2.399	<.001	<.001	3	4
UCEC	PPP5C →	+0.425	+2.389	<.001	<.001	3	4
COAD	SEH1L →	+0.441	+3.348	.009	.005	3	3
LUSC	ACAT2 →	+0.649	+3.506	.007	.002	2	4
LUSC	KRT8P40 →	+0.144	+3.655	.005	.003	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,278 associations by consensus.

SNRPD1 by CT47B1 expression — LUSC

Explore this box plot interactively →