CSPG4BP

Across TCGA patient cohorts, CSPG4BP RNA expression is significantly associated with the go_rna of many other GO terms, with 6,996 significant associations in total. STAD shows the largest number of these associations.

The most reproducible CSPG4BP-associated GO terms across cancer lineages are Epithelial to mesenchymal transition, Regulation of cell cycle G1/S phase transition, and Negative regulation of cell cycle G1/S phase transition. Each is linked with CSPG4BP in more than 19 cancer types. Because this analysis shows association rather than direction, both CSPG4BP-to-partner and partner-to-CSPG4BP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Epithelial to mesenchymal transition grouped by CSPG4BP-low versus CSPG4BP-high in TGCT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CSPG4BP→partner) and Y-score (partner→CSPG4BP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	Epithelial to mesenchymal transition →	+0.063	+0.040	<.001	<.001	3	20
ESCA	Regulation of cell cycle G1/S phase transition →	+0.056	+0.042	.007	.004	2	20
STAD	Negative regulation of cell cycle G1/S phase transition →	+0.045	+0.035	<.001	<.001	3	19
STAD	Muscle cell migration →	+0.059	+0.041	<.001	<.001	3	19
STAD	Notch signaling pathway →	+0.048	+0.046	<.001	<.001	3	19
STAD	Muscle cell proliferation →	+0.051	+0.037	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,996 associations by consensus.

Epithelial to mesenchymal transition by CSPG4BP expression — TGCT

Explore this box plot interactively →