CSNK1G3

Across TCGA patient cohorts, CSNK1G3 mutation is significantly associated with the RNA expression of many other genes, with 3,538 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CSNK1G3-associated genes across cancer lineages are RN7SKP148, MIR4748, and RNA5SP451. Each is linked with CSNK1G3 in more than 2 cancer types. Because this analysis shows association rather than direction, both CSNK1G3-to-partner and partner-to-CSNK1G3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SKP148 grouped by CSNK1G3-low versus CSNK1G3-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CSNK1G3→partner) and Y-score (partner→CSNK1G3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	RN7SKP148 →	+0.162	+4.197	<.001	.009	3	3
LUAD	MIR4748 →	+1.039	+3.708	<.001	.003	3	3
LUSC	RNA5SP451 →	+0.421	+7.593	<.001	<.001	3	3
UCEC	C9orf50 →	-0.369	-2.502	.005	.001	3	2
UCEC	RCC1 →	+0.355	+2.370	.008	.003	3	2
UCEC	IBA57 →	+0.295	+2.721	.005	.003	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,538 associations by consensus.

RN7SKP148 by CSNK1G3 expression — LUAD

Explore this box plot interactively →