CSF3R

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CSF3R mutation is significantly associated with the total protein of many other genes, with 46 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CSF3R-associated genes across cancer lineages are ERK2, Shc_pY317, and Caspase-7-cleavedD198. Each is linked with CSF3R in more than 2 cancer types. Because this analysis shows association rather than direction, both CSF3R-to-partner and partner-to-CSF3R results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ERK2 grouped by CSF3R-low versus CSF3R-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CSF3R→partner) and Y-score (partner→CSF3R) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECERK2 →+0.130+1.807.031.02433
COADShc_pY317 →-0.236-3.157.001.01833
COADCaspase-7-cleavedD198 →+1.509+3.016<.001.01833
COADASNS →+0.738+2.330<.001.02033
STADCD31 →-0.202-3.000.012.03632
COAD14-3-3_beta →-0.202-3.433.028.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 46 associations by consensus.

ERK2 by CSF3R expression — UCEC

Box plot of ERK2 in CSF3R-low vs CSF3R-high samples in UCEC.

Explore this box plot interactively →

Exploration