CSF1R

Across TCGA patient cohorts, CSF1R protein abundance is significantly associated with the RNA expression of many other genes, with 14,304 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CSF1R-associated genes across cancer lineages are STAB1, CD33, and CD4. Each is linked with CSF1R in more than 8 cancer types. Because this analysis shows association rather than direction, both CSF1R-to-partner and partner-to-CSF1R results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CSF1R versus STAB1 in GBM, with a Pearson correlation of 0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CSF1R→partner) and Y-score (partner→CSF1R) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	STAB1 →	+1.022	+0.467	<.001	<.001	3	9
GBM	CD33 →	+0.808	+0.716	<.001	<.001	3	9
UCEC	CD4 →	+1.051	+0.519	<.001	.002	3	9
OV	SLCO2B1 →	+1.306	+0.841	<.001	<.001	3	9
GBM	FOLR2 →	+1.356	+0.654	<.001	<.001	3	9
OV	LAIR1 →	+1.228	+0.593	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,304 associations by consensus.

CSF1R vs STAB1 — GBM

Explore this scatter interactively →