CRMP1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CRMP1 mutation is significantly associated with the RNA expression of many other genes, with 2,914 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CRMP1-associated genes across cancer lineages are CCNA2, UHRF1, and CHAF1A. Each is linked with CRMP1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CRMP1-to-partner and partner-to-CRMP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCNA2 grouped by CRMP1-low versus CRMP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CRMP1→partner) and Y-score (partner→CRMP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCCNA2 →+0.578+1.595.008.00634
SKCMUHRF1 →+0.784+3.182.005.00934
SKCMCHAF1A →+0.629+3.360.001.00434
UCECORC6 →+0.485+1.595.004.00634
CESCCDKN2AIPNLP2 →+0.093+5.306<.001.00633
COADRNU6-177P →+0.316+3.502<.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,914 associations by consensus.

CCNA2 by CRMP1 expression — UCEC

Box plot of CCNA2 in CRMP1-low vs CRMP1-high samples in UCEC.

Explore this box plot interactively →

Exploration