CPNE7

Across TCGA patient cohorts, CPNE7 protein abundance is significantly associated with the RNA expression of many other genes, with 3,488 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CPNE7-associated genes across cancer lineages are PTPRT, LRTM1, and KCNJ3. Each is linked with CPNE7 in more than 2 cancer types. Because this analysis shows association rather than direction, both CPNE7-to-partner and partner-to-CPNE7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CPNE7 versus PTPRT in GBM, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CPNE7→partner) and Y-score (partner→CPNE7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PTPRT →	+1.368	+0.582	<.001	<.001	3	3
GBM	LRTM1 →	+0.472	+0.725	<.001	<.001	3	2
GBM	KCNJ3 →	+1.147	+0.589	<.001	<.001	3	2
GBM	PYDC1 →	+0.469	+0.652	<.001	<.001	3	2
GBM	TCERG1L →	+0.402	+0.587	<.001	<.001	3	2
GBM	ERBB4 →	+1.552	+0.658	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,488 associations by consensus.

CPNE7 vs PTPRT — GBM

Explore this scatter interactively →