Across TCGA cell cohorts, CPNE1 mutation is significantly associated with the RNA expression of many other genes, with 22 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible CPNE1-associated genes across cancer lineages are FAM187B, OR1G1, and KLK9. Each is linked with CPNE1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CPNE1-to-partner and partner-to-CPNE1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CPNE1→partner) and Y-score (partner→CPNE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SOFT_TISSUE	FAM187B →	+0.022	+5.369	<.001	.004	3	1
SOFT_TISSUE	OR1G1 →	+0.160	+4.930	<.001	.008	3	1
SOFT_TISSUE	KLK9 →	+0.065	+5.369	<.001	.004	3	1
SOFT_TISSUE	IFNA14 →	+0.042	+5.369	<.001	.004	3	1
SOFT_TISSUE	FAM237A →	+0.043	+5.977	<.001	.001	3	1
SOFT_TISSUE	SLC5A8 →	+0.006	+4.930	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 22 associations by consensus.

Exploration

CPNE1 survival (RNA) · tumor vs normal (RNA) · all CPNE1 data types