CPD

Across TCGA cell cohorts, CPD RNA expression is significantly associated with the RNA expression of many other genes, with 11,939 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible CPD-associated genes across cancer lineages are PCYOX1, PIGS, and TAOK1. Each is linked with CPD in more than 15 cancer types. Because this analysis shows association rather than direction, both CPD-to-partner and partner-to-CPD results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CPD versus PCYOX1 in LUNG_NSCLC_LUSC, with a Pearson correlation of 0.51.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CPD→partner) and Y-score (partner→CPD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	PCYOX1 →	+1.471	+0.954	.001	.001	1	16
LIVER	PIGS →	+1.503	+1.863	<.001	<.001	3	13
UPPER_AERODIGESTIVE_TRACT	TAOK1 →	+1.234	+1.389	<.001	<.001	3	12
BONE	TMEM30A →	+1.261	+1.280	<.001	<.001	3	12
OESOPHAGUS	TM9SF3 →	+0.997	+1.741	<.001	<.001	3	12
BLOOD_Lymphoma	STAT3 →	+1.618	+0.892	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,939 associations by consensus.

CPD vs PCYOX1 — LUNG_NSCLC_LUSC

Explore this scatter interactively →