COQ2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, COQ2 mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible COQ2-associated genes across cancer lineages are SH3GL2, SYT10, and SLC22A6. Each is linked with COQ2 in more than 1 cancer types. Because this analysis shows association rather than direction, both COQ2-to-partner and partner-to-COQ2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SH3GL2 grouped by COQ2-low versus COQ2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COQ2→partner) and Y-score (partner→COQ2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINESH3GL2 →+1.233+3.474.002.00331
BLOOD_LymphomaSYT10 →+0.023+4.350<.001.00531
BLOOD_LymphomaSLC22A6 →+0.009+4.643<.001.00531
BLOOD_LymphomaFAM237A →+0.019+4.643<.001.00531
LARGE_INTESTINEOR2W3 →+0.703+3.355.008.00721
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

SH3GL2 by COQ2 expression — LARGE_INTESTINE

Box plot of SH3GL2 in COQ2-low vs COQ2-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration