COLGALT1

Across TCGA patient cohorts, COLGALT1 mutation is significantly associated with the RNA expression of many other genes, with 2,097 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible COLGALT1-associated genes across cancer lineages are ABHD17AP9, MIR4539, and PPIAP24. Each is linked with COLGALT1 in more than 1 cancer types. Because this analysis shows association rather than direction, both COLGALT1-to-partner and partner-to-COLGALT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ABHD17AP9 grouped by COLGALT1-low versus COLGALT1-high in GBM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COLGALT1→partner) and Y-score (partner→COLGALT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ABHD17AP9 →	+0.095	+5.352	.001	.005	3	2
GBM	MIR4539 →	+0.641	+5.584	<.001	.003	3	2
BLCA	PPIAP24 →	+0.100	+3.266	<.001	.009	3	2
HNSC	RNU7-81P →	+0.752	+5.069	<.001	.008	3	2
HNSC	RPS28P1 →	+0.298	+5.912	<.001	.002	3	2
UCEC	TIGD2 →	+0.422	+2.510	.009	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,097 associations by consensus.

ABHD17AP9 by COLGALT1 expression — GBM

Explore this box plot interactively →