COLEC12

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, COLEC12 mutation is significantly associated with the total protein of many other genes, with 46 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible COLEC12-associated genes across cancer lineages are Cyclin-B1, Notch1, and TFRC. Each is linked with COLEC12 in more than 2 cancer types. Because this analysis shows association rather than direction, both COLEC12-to-partner and partner-to-COLEC12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cyclin-B1 grouped by COLEC12-low versus COLEC12-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COLEC12→partner) and Y-score (partner→COLEC12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCyclin-B1 →+0.658+2.044<.001<.00133
UCECNotch1 →+0.109+1.165.006.02933
UCECTFRC →+0.494+2.584<.001<.00133
LUSCp21 →-0.378-2.000.006.02832
STADAkt_pS473 →-0.355-2.984.047.03432
UCECLck →+0.142+0.947.012.04732
Each partner links to its Q-omics profile. Showing the 6 strongest of 46 associations by consensus.

Cyclin-B1 by COLEC12 expression — UCEC

Box plot of Cyclin-B1 in COLEC12-low vs COLEC12-high samples in UCEC.

Explore this box plot interactively →

Exploration