COLEC12

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, COLEC12 mutation is significantly associated with the mutation status of many other genes, with 2,641 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible COLEC12-associated genes across cancer lineages are ADAMTSL3, EVX2, and B4GALT3. Each is linked with COLEC12 in more than 4 cancer types. Because this analysis shows association rather than direction, both COLEC12-to-partner and partner-to-COLEC12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ADAMTSL3 grouped by COLEC12-low versus COLEC12-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COLEC12→partner) and Y-score (partner→COLEC12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINADAMTSL3 →+3.731+5.133<.001<.00115
LARGE_INTESTINEEVX2 →+3.951+4.321<.001<.00114
UPPER_AERODIGESTIVE_TRACTB4GALT3 →+5.392+5.392.004.00413
UPPER_AERODIGESTIVE_TRACTDPP4 →+4.392+4.954.008.00813
UPPER_AERODIGESTIVE_TRACTDCLRE1A →+4.392+4.954.008.00813
LARGE_INTESTINECD1E →+3.799+3.329.005.00513
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,641 associations by consensus.

ADAMTSL3 by COLEC12 expression — SKIN

Box plot of ADAMTSL3 in COLEC12-low vs COLEC12-high samples in SKIN.

Explore this box plot interactively →

Exploration