COL9A2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, COL9A2 protein abundance is significantly associated with the RNA expression of many other genes, with 5,481 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible COL9A2-associated genes across cancer lineages are MEFV, TTYH2, and CAMK2N2. Each is linked with COL9A2 in more than 1 cancer types. Because this analysis shows association rather than direction, both COL9A2-to-partner and partner-to-COL9A2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, COL9A2 versus MEFV in BRCA, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COL9A2→partner) and Y-score (partner→COL9A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMEFV →+0.270+0.504<.001<.00132
GBMTTYH2 →+0.874+0.605<.001.00132
OVCAMK2N2 →+0.655+1.019.005.00132
GBMCADM2 →+1.610+0.521<.001.00132
BRCALPAR5 →+0.458+0.555.005.00332
LUADMIR3131 →-0.658-0.495.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,481 associations by consensus.

COL9A2 vs MEFV — BRCA

Per-sample scatter of COL9A2 vs MEFV in BRCA (Pearson r = 0.45).

Explore this scatter interactively →

Exploration