COL28A1

RNA expression — cross-omics
Cross-omicsRNA → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, COL28A1 RNA expression is significantly associated with the RNA expression of many other genes, with 4,283 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible COL28A1-associated genes across cancer lineages are STX19, ILDR1, and SLC15A2. Each is linked with COL28A1 in more than 5 cancer types. Because this analysis shows association rather than direction, both COL28A1-to-partner and partner-to-COL28A1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COL28A1→partner) and Y-score (partner→COL28A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYSTX19 →+1.265+0.654<.001.00236
LUNG_NSCLC_LUADILDR1 →+1.607+1.039<.001<.00135
LUNG_NSCLC_LUSCSLC15A2 →+1.370+1.227<.001.00426
LUNG_SCLCANO9 →+2.231+0.648<.001<.00135
LUNG_NSCLC_LUADSOWAHB →+1.464+1.235<.001<.00135
PANCREASSLC22A18 →+2.026+0.706<.001<.00125
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,283 associations by consensus.

Exploration