COL17A1

Across TCGA cell cohorts, COL17A1 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,724 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible COL17A1-associated GO terms across cancer lineages are Mesoderm formation, Hemidesmosome assembly, and Regulation of positive chemotaxis. Each is linked with COL17A1 in more than 9 cancer types. Because this analysis shows association rather than direction, both COL17A1-to-partner and partner-to-COL17A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mesoderm formation grouped by COL17A1-low versus COL17A1-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (COL17A1→partner) and Y-score (partner→COL17A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIVER	Mesoderm formation →	+0.166	+1.496	.002	.001	3	10
OESOPHAGUS	Hemidesmosome assembly →	+0.264	+3.280	.003	.001	2	10
LUNG_NSCLC_LUSC	Regulation of positive chemotaxis →	+0.293	+3.387	<.001	.001	3	9
LUNG_SCLC	Mammary gland morphogenesis →	+0.274	+1.810	<.001	.002	3	9
BREAST	Regulation of ribonuclease activity →	+0.279	+2.934	<.001	<.001	3	9
STOMACH	Positive regulation of extracellular exosome assembly →	+0.192	+3.314	.001	.008	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,724 associations by consensus.

Mesoderm formation by COL17A1 expression — LIVER

Explore this box plot interactively →