COA4

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, COA4 mass-spec protein differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of COA4’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where COA4 mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types COA4 is over-expressed in tumor, although a few such as CCRCC and HNSC show the opposite, repressed pattern.

CCRCC, LUAD, and HNSC are the cancer types where COA4 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in COA4 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCFemaleII,III,IV−1.070<.00112view →
LUADMaleIII,IV+0.685<.0019view →
HNSCMaleII,III,IV−0.388<.0018view →
PDACAllAll+0.622<.0016view →
COADFemaleIV−0.487.0021view →
LSCCFemaleII,III,IV−0.161.0471view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

COA4–CCRCC

Tumor-vs-normal mass-spec protein box plot for COA4 in CCRCC.

Open the CCRCC breakdown →

Exploration