CNTNAP3

Across TCGA patient cohorts, CNTNAP3 protein abundance is significantly associated with the RNA expression of many other genes, with 452 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CNTNAP3-associated genes across cancer lineages are RPL18A, MYL7, and OTX1. Each is linked with CNTNAP3 in more than 1 cancer types. Because this analysis shows association rather than direction, both CNTNAP3-to-partner and partner-to-CNTNAP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNTNAP3 versus RPL18A in GBM, with a Pearson correlation of 0.65.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNTNAP3→partner) and Y-score (partner→CNTNAP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RPL18A →	+0.875	+1.331	.002	.001	3	1
GBM	MYL7 →	+0.476	+1.797	<.001	.001	3	1
GBM	OTX1 →	+1.663	+1.303	.009	.007	3	1
GBM	RPL23 →	+0.625	+1.633	.006	<.001	3	1
GBM	RPS11 →	+0.666	+1.259	.007	.004	3	1
GBM	RPL13A →	+0.791	+1.253	.002	.004	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 452 associations by consensus.

CNTNAP3 vs RPL18A — GBM

Explore this scatter interactively →