CNTNAP1

Across TCGA patient cohorts, CNTNAP1 protein abundance is significantly associated with the RNA expression of many other genes, with 7,081 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CNTNAP1-associated genes across cancer lineages are RN7SL471P, RASGRF2, and CNRIP1. Each is linked with CNTNAP1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CNTNAP1-to-partner and partner-to-CNTNAP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNTNAP1 versus RN7SL471P in GBM, with a Pearson correlation of 0.64.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNTNAP1→partner) and Y-score (partner→CNTNAP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RN7SL471P →	+2.011	+0.711	<.001	<.001	3	3
OV	RASGRF2 →	+0.923	+0.559	<.001	.002	2	4
OV	CNRIP1 →	+0.961	+0.550	<.001	.006	2	4
HNSC	PDGFRA →	+1.461	+0.530	.002	.003	3	3
UCEC	PTH1R →	+0.956	+0.382	<.001	.009	3	3
HNSC	CTHRC1 →	+1.139	+0.434	.001	.004	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,081 associations by consensus.

CNTNAP1 vs RN7SL471P — GBM

Explore this scatter interactively →