CNPPD1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CNPPD1 mutation is significantly associated with the total protein of many other genes, with 27 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CNPPD1-associated genes across cancer lineages are eIF4E, 4E-BP1, and eEF2. Each is linked with CNPPD1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CNPPD1-to-partner and partner-to-CNPPD1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by CNPPD1-low versus CNPPD1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNPPD1→partner) and Y-score (partner→CNPPD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.194+2.321.035.03432
UCEC4E-BP1 →+0.334+3.029.004.01832
UCECeEF2 →+0.439+3.169.004.01831
UCECERK2 →+0.243+2.321.003.03431
UCECFibronectin →-0.330-2.449.022.01931
UCECFOXO3a_pS318_S321 →-0.136-2.807.012.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

eIF4E by CNPPD1 expression — UCEC

Box plot of eIF4E in CNPPD1-low vs CNPPD1-high samples in UCEC.

Explore this box plot interactively →

Exploration