CNOT8

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CNOT8 mutation is significantly associated with the mutation status of many other genes, with 1,586 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CNOT8-associated genes across cancer lineages are RBM5, SOAT1, and SEC61A1. Each is linked with CNOT8 in more than 1 cancer types. Because this analysis shows association rather than direction, both CNOT8-to-partner and partner-to-CNOT8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RBM5 grouped by CNOT8-low versus CNOT8-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNOT8→partner) and Y-score (partner→CNOT8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINERBM5 →+3.350+4.584.003.00312
LARGE_INTESTINESOAT1 →+3.672+4.799.002.00212
LARGE_INTESTINESEC61A1 →+3.672+4.799.002.00212
LARGE_INTESTINEMAP2K4 →+2.865+4.217.007.00712
LARGE_INTESTINEFOSL2 →+4.087+5.044.001.00112
LARGE_INTESTINEDHX32 →+5.672+5.672<.001<.00112
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,586 associations by consensus.

RBM5 by CNOT8 expression — LARGE_INTESTINE

Box plot of RBM5 in CNOT8-low vs CNOT8-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration