CNMD

Across TCGA patient cohorts, CNMD RNA expression is significantly associated with the protein abundance of many other proteins, with 7,691 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible CNMD-associated proteins across cancer lineages are BSG, PSIP1, and RPRD2_T723. Each is linked with CNMD in more than 3 cancer types. Because this analysis shows association rather than direction, both CNMD-to-partner and partner-to-CNMD results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNMD versus BSG in HNSC, with a Pearson correlation of -0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CNMD→partner) and Y-score (partner→CNMD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	BSG →	-0.363	-0.679	<.001	.007	3	4
HNSC	PSIP1 →	+0.429	+0.594	<.001	.004	3	3
HNSC	RPRD2_T723 →	+0.532	+0.813	<.001	.003	3	3
GBM	RTN1 →	+0.463	+0.747	<.001	.003	3	3
CCRCC	SEC16A_S1305 →	-0.713	-0.559	<.001	<.001	3	3
CCRCC	SLC20A2_S256 →	-0.825	-0.570	.002	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,691 associations by consensus.

CNMD vs BSG — HNSC

Explore this scatter interactively →