CNKSR1

Across TCGA patient cohorts, CNKSR1 RNA expression is significantly associated with the RNA expression of many other genes, with 16,257 significant associations in total. THYM shows the largest number of these associations.

The most reproducible CNKSR1-associated genes across cancer lineages are PRKCZ-AS1, CCNL2, and YJEFN3. Each is linked with CNKSR1 in more than 27 cancer types. Because this analysis shows association rather than direction, both CNKSR1-to-partner and partner-to-CNKSR1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNKSR1 versus PRKCZ-AS1 in LUAD, with a Pearson correlation of 0.53.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNKSR1→partner) and Y-score (partner→CNKSR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	PRKCZ-AS1 →	+0.897	+0.628	<.001	<.001	3	28
UVM	CCNL2 →	+0.973	+0.271	<.001	<.001	3	27
UVM	YJEFN3 →	+1.720	+0.298	<.001	<.001	3	27
SCLC	LENG8 →	+1.187	+0.849	<.001	<.001	3	26
UVM	WDR27 →	+1.084	+0.373	<.001	<.001	3	26
READ	SLC25A29 →	+0.883	+0.587	<.001	<.001	3	26

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,257 associations by consensus.

CNKSR1 vs PRKCZ-AS1 — LUAD

Explore this scatter interactively →