CNKSR1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CNKSR1 mutation is significantly associated with the total protein of many other genes, with 34 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CNKSR1-associated genes across cancer lineages are 14-3-3_beta, Akt_pT308, and ATM. Each is linked with CNKSR1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CNKSR1-to-partner and partner-to-CNKSR1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 14-3-3_beta grouped by CNKSR1-low versus CNKSR1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNKSR1→partner) and Y-score (partner→CNKSR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC14-3-3_beta →-0.086-2.432.013.01832
UCECAkt_pT308 →+0.521+1.440.017.02432
UCECATM →-0.613-2.893<.001.00132
UCECeIF4E →+0.154+2.472.035.01031
UCECA-Raf_pS299 →-0.100-2.000.015.03031
UCECGAPDH →+0.369+2.321.047.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 34 associations by consensus.

14-3-3_beta by CNKSR1 expression — UCEC

Box plot of 14-3-3_beta in CNKSR1-low vs CNKSR1-high samples in UCEC.

Explore this box plot interactively →

Exploration