CNGA4

Across TCGA patient cohorts, CNGA4 protein abundance is significantly associated with the RNA expression of many other genes, with 2,031 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CNGA4-associated genes across cancer lineages are CCNB2, GK-IT1, and NFKBIA. Each is linked with CNGA4 in more than 2 cancer types. Because this analysis shows association rather than direction, both CNGA4-to-partner and partner-to-CNGA4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNGA4 versus CCNB2 in HNSC, with a Pearson correlation of -0.65.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNGA4→partner) and Y-score (partner→CNGA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	CCNB2 →	-1.085	-0.364	.004	.007	3	3
UCEC	GK-IT1 →	+1.893	+0.723	.004	.006	3	3
GBM	NFKBIA →	+0.673	+0.423	.002	.002	3	2
LSCC	MEFV →	+0.922	+0.426	<.001	<.001	3	2
HNSC	VSIR →	+0.958	+0.382	.001	.002	3	2
HNSC	FBXO5 →	-0.804	-0.433	.008	.004	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,031 associations by consensus.

CNGA4 vs CCNB2 — HNSC

Explore this scatter interactively →