CNGA3

Across TCGA patient cohorts, CNGA3 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,088 significant associations in total. STAD shows the largest number of these associations.

The most reproducible CNGA3-associated GO terms across cancer lineages are Regulation of cell morphogenesis, Erythrocyte homeostasis, and Negative regulation of cytoskeleton organization. Each is linked with CNGA3 in more than 19 cancer types. Because this analysis shows association rather than direction, both CNGA3-to-partner and partner-to-CNGA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of cell morphogenesis grouped by CNGA3-low versus CNGA3-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CNGA3→partner) and Y-score (partner→CNGA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of cell morphogenesis →	+0.047	+0.322	<.001	<.001	3	20
STAD	Erythrocyte homeostasis →	+0.057	+0.226	<.001	<.001	3	20
ESCA	Negative regulation of cytoskeleton organization →	+0.062	+0.455	<.001	<.001	3	20
STAD	Obsolete selective autophagy →	+0.053	+0.292	<.001	<.001	3	20
STAD	Vacuolar transport →	+0.049	+0.229	<.001	<.001	3	20
STAD	Regulation of epithelial cell migration →	+0.057	+0.317	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,088 associations by consensus.

Regulation of cell morphogenesis by CNGA3 expression — STAD

Explore this box plot interactively →