CNGA3

Across TCGA cell cohorts, CNGA3 RNA expression is significantly associated with the go_rna of many other GO terms, with 265 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible CNGA3-associated GO terms across cancer lineages are Ovulation from ovarian follicle, Regulation of transforming growth factor beta receptor signaling pathway, and Regulation of tumor necrosis factor-mediated signaling pathway. Each is linked with CNGA3 in more than 3 cancer types. Because this analysis shows association rather than direction, both CNGA3-to-partner and partner-to-CNGA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ovulation from ovarian follicle grouped by CNGA3-low versus CNGA3-high in LARGE_INTESTINE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CNGA3→partner) and Y-score (partner→CNGA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	Ovulation from ovarian follicle →	+0.835	+0.016	.001	.009	3	3
LARGE_INTESTINE	Regulation of transforming growth factor beta receptor signaling pathway →	+0.050	+0.017	<.001	.005	3	3
LUNG_NSCLC_LUAD	Regulation of tumor necrosis factor-mediated signaling pathway →	+0.040	+0.028	.003	.002	2	4
SOFT_TISSUE	Positive regulation of hydrogen peroxide biosynthetic process →	+0.112	+0.070	.001	.008	3	3
SKIN	Regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway →	+0.057	+0.029	.003	.002	3	3
LUNG_SCLC	Regulation of body fluid levels →	-0.039	-0.721	.009	.007	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 265 associations by consensus.

Ovulation from ovarian follicle by CNGA3 expression — LARGE_INTESTINE

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