CNFN

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CNFN RNA expression is significantly associated with the protein abundance of many other proteins, with 10,309 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CNFN-associated proteins across cancer lineages are FAM83H_S881, GIMAP8, and KRT16_S44. Each is linked with CNFN in more than 3 cancer types. Because this analysis shows association rather than direction, both CNFN-to-partner and partner-to-CNFN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNFN versus FAM83H_S881 in LSCC, with a Pearson correlation of 0.53.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CNFN→partner) and Y-score (partner→CNFN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCFAM83H_S881 →+0.909+1.478<.001<.00134
UCECGIMAP8 →-0.465-1.232<.001<.00134
UCECKRT16_S44 →+2.240+2.110.004.00734
PDACKRT5_S71 →+2.023+1.069.009.00334
LSCCDSC2_S873 →+0.768+1.806<.001<.00134
HNSCFAM83H →+0.562+1.502<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,309 associations by consensus.

CNFN vs FAM83H_S881 — LSCC

Per-sample scatter of CNFN vs FAM83H_S881 in LSCC (Pearson r = 0.53).

Explore this scatter interactively →

Exploration